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SCOPE Field note · Experiment 1

Experiment 1: can a first-timer find a parasite egg?

March 24, 2025 · 4 min read

Before asking community health workers to diagnose schistosomiasis with a $2.50 paper microscope, we asked a simpler question: can someone who has never used a microscope find a parasite egg at all?

Bilharzia (schistosomiasis) is a neglected tropical disease that affects more than 200 million people worldwide. In Ogun State, Nigeria, genitourinary schistosomiasis caused by Schistosoma haematobium stays stubbornly common: despite mass drug administration, tangled barriers keep it from being eliminated and keep people getting reinfected.

Slide: a map of schistosomiasis prevalence across Africa beside a circular diagram of the parasite’s life cycle through human and snail hosts
The problem, and the parasite’s life cycle through human and snail hosts.
The question

Why a test that travels

Female genital schistosomiasis (FGS) is of particular concern: it’s associated with persistent HPV infection, cervical cancer, bladder cancer, and infertility. In the fishing communities near the Oyan Reservoir, the logistics and cost of reaching a clinic are themselves a barrier to diagnosis. And the gold standard, spotting eggs under a microscope, is costly and requires transport to a fully equipped clinic. When we spoke with Ogun State doctors and parasitologists — Dr. Adebayo, Dr. Ekpo, and Dr. Oluwole — they confirmed the need for diagnostics that are community-accepted, portable, and easy to use.

Slide listing the objectives and hypothesis beside a life-cycle diagram
Objectives and hypothesis.

What we set out to do

1

Find a sustainable sample prep

A preparation method with minimal cost and supplies.

2

Measure novice accuracy

How accurately untrained microscope users can read the Foldscope.

Our hypothesis: the Foldscope will enable rapid, field-friendly detection of parasite eggs, with satisfactory accuracy, at minimal cost and infrastructure.

The setup

Twenty-four blinded slides

Using fixed S. mansoni eggs suspended in saline, we prepared 24 slides at concentrations meant to mimic human urine, roughly 10 to 200 eggs per sample. The eggs came from Dr. Jayhun Lee’s murine model of schistosomiasis. In a blinded assessment, users rated each slide positive or negative for eggs, at their own pace, using a smartphone coupled to the Foldscope. We noted how long each assessment took, and each person’s previous microscope experience.

Methodology slide with Foldscope specifications (340× magnification, about 2 µm resolution, 0.5 mm back focal length) and a schematic of a novel microfluidic slide
The method, and the Foldscope’s specs: 340× magnification, ~2 µm resolution, ~0.5 mm back focal length, LED illumination, and a magnetic coupling to a phone camera.
The results

79% accuracy, in about four minutes

79%
Accuracy
72%
Sensitivity: infected slides correctly called
100%
Specificity: no false positives
4:14
Average minutes per assessment

How the calls broke down

24 slidesCalled positiveCalled negative
Actually positive (18)13 (true positive)5 (false negative)
Actually negative (6)0 (false positive)6 (true negative)

Precision (positive predictive value) 100%; F1 score 83.7%.

Results slide with a table of accuracy metrics, a bar chart, and a Foldscope micrograph of a schistosome egg at 340×
The results slide, with a schistosome egg at 340×.

Every mistake was a miss, not a false alarm — novices never saw an egg that wasn’t there. That pointed us straight at the next problem: concentrating the eggs, so there’s less haystack to search.

What it told us

A starting line

This was the first evidence we’d seen that untrained users could read the Foldscope accurately enough to suggest a community-led screening approach could work. The Foldscope is a highly cost-effective alternative for resource-limited settings: assessment is quick, and there’s no need for electricity. And if paired with a device to concentrate the eggs, we expected performance to improve.

Conclusions slide beside a photo of two students reading slides with Foldscopes at a lab bench
Conclusions, and two of our first testers at the bench.
*How it held up: in the 2025 field study, laboratory scientists using the Foldscope reached 91% sensitivity and 99% specificity, and community health workers’ accuracy rose from 52.5% to 92.1% in eight days. Read about the paper →
Filed under SCOPE
Focus Diagnostics R&D · Place Houston
Where it started

Every field study starts at a lab bench

Twenty-four slides and a stopwatch were the first step toward putting diagnosis in community hands. Thank you for following from the beginning.